MLOC_58338 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.84890.034481100
LEAShoots from the seedlings (10 cm shoot stage)000.2223920
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)3.063310.3017290.639120
NODDeveloping tillers at six leaf stage, 3rd internode4.151933.857725.232266.69547
CAR5Developing grain, bracts removed (5 DPA)0.3388961.002540.3371660
CAR15Developing grain, bracts removed (15 DPA)0.2789610.2554450.4173890.699547



CDS Structure of MLOC_58338






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58338.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369571NoneNoneNoneNone
MLOC_58338.1CUST_6981_PI427708080AvailableAvailablecontig_42574 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g38490.1 +2 2e-26 104 86/154 (56%) 13101.m03924 protein expressed protein
TAIR PP10None-----