- Predicted Gene MLOC_58337
MLOC_58337 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58337_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58337_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 12.1247 | 10.7821 | 11.1685 | 11.8658 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.71902 | 3.20103 | 3.82997 | 3.75581 |
INF1 | Young developing inflorescences (5mm) | 18.9522 | 20.627 | 18.6018 | 17.8583 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.9175 | 17.6611 | 17.6567 | 21.2453 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.2384 | 10.7079 | 13.0636 | 13.7 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.41849 | 3.34337 | 7.08702 | 14.625 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.74166 | 7.04016 | 6.89882 | 7.73053 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.5198 | 1.20503 | 1.33516 | 3.53779 |
CDS Structure of MLOC_58337
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58337.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g17294.2 |
+1 |
2e-114 |
348 |
169/191 (88%) |
13108.m01848 protein PSF3 - Putative GINS complex subunit, expressed |
TAIR PP10 |
AT3G55490.1 |
+1 |
3e-67 |
223 |
110/184 (60%) |
GINS complex protein | chr3:20572171-20573415 REVERSE LENGTH=185 |