MLOC_58291 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.4975613.612512.130112.577
LEAShoots from the seedlings (10 cm shoot stage)10.751211.20987.918119.11212
INF1Young developing inflorescences (5mm)18.88518.860418.366316.5773
INF2Developing inflorescences (1-1.5 cm)22.308123.354320.352225.2909
ROORoots from the seedlings (10 cm shoot stage)6.445715.463211.095818.3567
NODDeveloping tillers at six leaf stage, 3rd internode10.461111.410.683539.504
CAR5Developing grain, bracts removed (5 DPA)13.019810.957111.617211.9483
CAR15Developing grain, bracts removed (15 DPA)4.551794.332114.6653910.7476



CDS Structure of MLOC_58291






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58291.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58291.1CUST_13822_PI427708080AvailableAvailablecontig_42528 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55130.2 -3 0.0 568 385/668 (58%) 13103.m05992 protein expressed protein
TAIR PP10 AT1G26620.1 -3 5e-27 120 228/910 (25%) Plant protein of unknown function (DUF863) | chr1:9195838-9198719 REVERSE LENGTH=867