MLOC_58282 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.400653.314973.340793.43846
LEAShoots from the seedlings (10 cm shoot stage)4.123640.6182751.180921.81391
INF1Young developing inflorescences (5mm)1.417211.412551.203631.20021
INF2Developing inflorescences (1-1.5 cm)1.035531.449530.9711231.40444
ROORoots from the seedlings (10 cm shoot stage)2.711444.432952.637625.50168
NODDeveloping tillers at six leaf stage, 3rd internode4.961197.441160.2846422.4542
CAR5Developing grain, bracts removed (5 DPA)4.777344.22424.226594.57522
CAR15Developing grain, bracts removed (15 DPA)0.08200940.07020860.1327330.215829



CDS Structure of MLOC_58282






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58282.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58282.1CUST_13819_PI427708080AvailableAvailablecontig_42519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18710.1 +3 0.0 1403 803/1328 (60%) 13103.m02240 protein expressed protein
TAIR PP10 AT2G38440.1 +3 3e-61 232 189/607 (31%) | Symbols: ITB1, SCAR2, DIS3, WAVE4, ATSCAR2 | SCAR homolog 2 | chr2:16095550-16100851 FORWARD LENGTH=1399