- Predicted Gene MLOC_58281
MLOC_58281 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 48.7359 | 44.9566 | 43.4609 | 50.5232 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.061 | 33.0293 | 30.4208 | 29.5313 |
| INF1 | Young developing inflorescences (5mm) | 75.9084 | 78.9894 | 70.8842 | 68.5518 |
| INF2 | Developing inflorescences (1-1.5 cm) | 75.3262 | 63.5144 | 58.7557 | 78.0341 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.7144 | 41.7124 | 40.9335 | 53.5245 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.0526 | 13.8136 | 21.6343 | 52.5077 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 44.0812 | 45.6001 | 45.3142 | 48.2539 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.859 | 22.1644 | 17.5522 | 51.033 |
CDS Structure of MLOC_58281
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58281.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g18720.1 |
+2 |
2e-108 |
320 |
193/230 (84%) |
13103.m02241 protein RNA recognition motif containing protein, putative, expressed |
| TAIR PP10 |
AT2G30260.1 |
+2 |
7e-81 |
248 |
148/232 (64%) |
| Symbols: U2B | U2 small nuclear ribonucleoprotein B | chr2:12905557-12907434 REVERSE LENGTH=232 |