MLOC_5828 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.845395 | 0.530333 | 0.346432 | 0.522409 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.815339 | 0.246697 | 0.483061 | 0.415329 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.062696 | 0.0496149 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.434744 | 0.159682 | 0.574831 | 0.385336 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.11998 | 1.53729 | 1.76356 | 1.57277 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.80894 | 3.94346 | 4.45409 | 9.79483 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.47034 | 3.54923 | 2.6697 | 3.00916 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.21641 | 7.17144 | 9.78125 | 18.6267 |
CDS Structure of MLOC_5828
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5828.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g37470.1 |
-3 |
3e-83 |
248 |
120/135 (89%) |
13105.m03906 protein transmembrane amino acid transporter protein, putative, expressed |
| TAIR PP10 |
AT2G38120.1 |
-3 |
1e-79 |
242 |
116/135 (86%) |
| Symbols: AUX1, WAV5, PIR1, MAP1 | Transmembrane amino acid transporter family protein | chr2:15973493-15976792 FORWARD LENGTH=485 |