- Predicted Gene MLOC_58276
MLOC_58276 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0.103762 | 0.0765456 | 0.141179 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0892933 | 0 | 0.132481 | 0.110679 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0450898 | 0.0426035 | 0.0299877 | 0.0498402 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.272004 | 0.0882024 | 0.0832484 | 0.157861 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.317907 | 0.353307 | 0 | 1.55806 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.07538 | 1.97495 | 1.56821 | 2.30152 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.039108 | 0.0589967 |
CDS Structure of MLOC_58276
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58276.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g54160.2 |
+3 |
3e-91 |
288 |
212/398 (53%) |
13102.m12340 protein AP2 domain containing protein, expressed |
TAIR PP10 |
AT3G14230.3 |
+3 |
5e-27 |
112 |
94/232 (41%) |
| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=374 |