MLOC_58270 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains102.87386.160192.584395.4287
LEAShoots from the seedlings (10 cm shoot stage)98.2567152.48549.304781.8273
INF1Young developing inflorescences (5mm)12.84476.848468.013628.33336
INF2Developing inflorescences (1-1.5 cm)17.229631.623937.8533.9046
ROORoots from the seedlings (10 cm shoot stage)133.879103.31491.0668119.592
NODDeveloping tillers at six leaf stage, 3rd internode68.764262.0292170.775226.412
CAR5Developing grain, bracts removed (5 DPA)86.884796.77295.055998.3161
CAR15Developing grain, bracts removed (15 DPA)2.763671.878133.820396.97709



CDS Structure of MLOC_58270






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58270.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357135NoneNoneNoneNone
MLOC_58270.2CUST_3914_PI427708080AvailableAvailablecontig_42505 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 -1 0.0 780 376/578 (65%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G62660.1 -1 0.0 587 301/584 (52%) Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648