- Predicted Gene MLOC_58253
MLOC_58253 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58253_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58253_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.08826 | 3.34163 | 3.66572 | 3.52305 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.98831 | 4.11397 | 4.21503 | 3.60772 |
INF1 | Young developing inflorescences (5mm) | 6.49244 | 7.82027 | 8.70759 | 6.62256 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.79029 | 8.29027 | 7.85552 | 9.36268 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.7535 | 3.19173 | 3.18517 | 3.93218 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.90092 | 2.8234 | 3.64831 | 9.46681 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.08895 | 5.87104 | 6.0548 | 5.76936 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.3445 | 2.3482 | 2.72977 | 5.75207 |
CDS Structure of MLOC_58253
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58253.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g04640.1 |
+3 |
5e-154 |
465 |
255/333 (77%) |
13106.m00425 protein bromodomain domain containing protein, expressed |
TAIR PP10 |
AT2G34900.1 |
+3 |
2e-76 |
258 |
163/358 (46%) |
| Symbols: GTE01, IMB1, GTE1 | Transcription factor GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386 |