MLOC_58234 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.06505090.0340841
LEAShoots from the seedlings (10 cm shoot stage)1.665915.8762921.16357.82973
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.04283480.3081540.0928079
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58234






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58234.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58234.1CUST_13809_PI427708080AvailableAvailablecontig_42470 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55760.1 +2 0.0 611 364/438 (83%) 13104.m05786 protein OsWAK55 - OsWAK receptor-like protein kinase
TAIR PP10 AT1G19390.1 +2 7e-101 323 206/406 (51%) Wall-associated kinase family protein | chr1:6700772-6703368 REVERSE LENGTH=788