MLOC_58215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.1351615.30268.6666212.3955
LEAShoots from the seedlings (10 cm shoot stage)2.392510.366060.984260.953826
INF1Young developing inflorescences (5mm)4.383725.448865.615194.99445
INF2Developing inflorescences (1-1.5 cm)2.622735.461453.038454.8927
ROORoots from the seedlings (10 cm shoot stage)7.33785.326975.745356.05098
NODDeveloping tillers at six leaf stage, 3rd internode1.325451.684620.02617042.95063
CAR5Developing grain, bracts removed (5 DPA)3.368583.39282.373663.33135
CAR15Developing grain, bracts removed (15 DPA)0.1408170.2433460.2407740.602771



CDS Structure of MLOC_58215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58215.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366067NoneNoneNoneNone
MLOC_58215.3CUST_3905_PI427708080AvailableAvailablecontig_42456 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g64030.1 -3 2e-132 382 191/238 (80%) 13103.m07108 protein receptor protein kinase, putative, expressed
TAIR PP10 AT4G34215.2 -3 2e-76 238 132/242 (55%) Domain of unknown function (DUF303) | chr4:16380203-16381192 REVERSE LENGTH=260