- Predicted Gene MLOC_58213
MLOC_58213 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58213_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.55212 | 1.37027 | 1.81689 | 1.44759 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.84389 | 0.259397 | 1.06621 | 0.90729 |
INF1 | Young developing inflorescences (5mm) | 0.122155 | 0.0656275 | 0 | 0.0885067 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0556717 | 0.0789383 | 0.0701478 | 0.0768624 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.881167 | 0.466498 | 0.625516 | 0.613281 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.18674 | 3.05682 | 0.0638803 | 8.05009 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.50526 | 0.377134 | 0.698957 | 0.502447 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.305147 | 0.266102 | 0.0444244 | 0.558524 |
CDS Structure of MLOC_58213
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58213.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
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Rice PP6 |
LOC_Os08g10604.1 |
-3 |
0.0 |
600 |
327/412 (79%) |
13108.m01134 protein pectinesterase, putative, expressed |
TAIR PP10 |
AT1G05310.1 |
-3 |
9e-151 |
441 |
217/337 (64%) |
Pectin lyase-like superfamily protein | chr1:1550615-1552434 REVERSE LENGTH=393 |