MLOC_58203 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.73087.865988.538558.27571
LEAShoots from the seedlings (10 cm shoot stage)4.923520.4365410.2952311.52804
INF1Young developing inflorescences (5mm)42.4788102.75856.822957.6718
INF2Developing inflorescences (1-1.5 cm)7.295240.5911540.07195993.09077
ROORoots from the seedlings (10 cm shoot stage)41.749118.437921.357121.8348
NODDeveloping tillers at six leaf stage, 3rd internode9.484649.188375.9478120.0216
CAR5Developing grain, bracts removed (5 DPA)00.036383200.0414315
CAR15Developing grain, bracts removed (15 DPA)0.2140520.1276050.4221330.578451



CDS Structure of MLOC_58203






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58203.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358335NoneNoneNoneNone
MLOC_58203.1CUST_3902_PI427708080AvailableAvailablecontig_42447 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43580.2 -1 1e-75 240 138/152 (91%) 13104.m04331 protein DUF640 domain containing protein, putative, expressed
TAIR PP10 AT2G31160.1 -1 2e-65 213 118/150 (79%) | Symbols: LSH3 | Protein of unknown function (DUF640) | chr2:13277903-13278562 FORWARD LENGTH=219