- Predicted Gene MLOC_58203
MLOC_58203 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58203_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58203_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.7308 | 7.86598 | 8.53855 | 8.27571 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.92352 | 0.436541 | 0.295231 | 1.52804 |
INF1 | Young developing inflorescences (5mm) | 42.4788 | 102.758 | 56.8229 | 57.6718 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.29524 | 0.591154 | 0.0719599 | 3.09077 |
ROO | Roots from the seedlings (10 cm shoot stage) | 41.7491 | 18.4379 | 21.3571 | 21.8348 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.48464 | 9.18837 | 5.94781 | 20.0216 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0363832 | 0 | 0.0414315 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.214052 | 0.127605 | 0.422133 | 0.578451 |
CDS Structure of MLOC_58203
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58203.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g43580.2 |
-1 |
1e-75 |
240 |
138/152 (91%) |
13104.m04331 protein DUF640 domain containing protein, putative, expressed |
TAIR PP10 |
AT2G31160.1 |
-1 |
2e-65 |
213 |
118/150 (79%) |
| Symbols: LSH3 | Protein of unknown function (DUF640) | chr2:13277903-13278562 FORWARD LENGTH=219 |