- Predicted Gene MLOC_58202
MLOC_58202 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58202_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58202_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.16698 | 0.866422 | 0.895438 | 1.08403 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.838698 | 0.676872 | 0.25255 | 0.536237 |
INF1 | Young developing inflorescences (5mm) | 0.709086 | 1.43383 | 1.13974 | 1.08974 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.16636 | 2.79843 | 2.44967 | 3.12415 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.577154 | 0.775391 | 1.16391 | 1.13027 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.853009 | 1.03435 | 0.618536 | 3.4628 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.66004 | 3.75813 | 2.6154 | 3.51674 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.074999 | 0.124744 | 0.0823642 | 0.269581 |
CDS Structure of MLOC_58202
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58202.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g09390.1 |
-2 |
4e-101 |
315 |
171/284 (60%) |
13108.m00991 protein OsFBX264 - F-box domain containing protein |
TAIR PP10 |
AT4G05460.1 |
-2 |
8e-32 |
126 |
97/308 (31%) |
RNI-like superfamily protein | chr4:2761106-2762400 REVERSE LENGTH=302 |