- Predicted Gene MLOC_58183
MLOC_58183 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.7216 | 11.5519 | 10.4658 | 14.571 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.3429 | 12.6406 | 11.4853 | 13.5101 |
| INF1 | Young developing inflorescences (5mm) | 39.6602 | 42.4216 | 42.0874 | 43.754 |
| INF2 | Developing inflorescences (1-1.5 cm) | 64.8242 | 68.3922 | 57.579 | 85.4717 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.38234 | 13.6841 | 8.59152 | 21.5799 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.52777 | 16.983 | 13.4175 | 68.4849 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 34.1831 | 30.7204 | 30.9904 | 38.0009 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.1651 | 19.8515 | 23.2059 | 60.264 |
CDS Structure of MLOC_58183
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58183.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g05880.1 |
+3 |
9e-118 |
395 |
275/700 (39%) |
13102.m00649 protein RNA polymerase Rpb1, domain 2 family protein, expressed |
| TAIR PP10 |
AT2G40030.1 |
+3 |
1e-40 |
162 |
153/558 (27%) |
| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976 |