MLOC_58176 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07958080.04773560.04155320.054922
LEAShoots from the seedlings (10 cm shoot stage)1.152481.782952.600121.54672
INF1Young developing inflorescences (5mm)0.0123318000.0111539
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.2704430.1714080.08314810.199376
NODDeveloping tillers at six leaf stage, 3rd internode000.007867830.020533
CAR5Developing grain, bracts removed (5 DPA)0.031216300.03001420.0390613
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58176






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58176.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368599NoneNoneNoneNone
MLOC_58176.2CUST_3899_PI427708080AvailableAvailablecontig_42417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03280.1 -3 0.0 817 505/843 (60%) 13103.m00308 protein TKL_IRAK_CrRLK1L-1.6 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
TAIR PP10 AT5G24010.1 -3 2e-161 498 342/780 (44%) Protein kinase superfamily protein | chr5:8113910-8116384 FORWARD LENGTH=824