- Predicted Gene MLOC_58166
MLOC_58166 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58166_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58166_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.2317 | 5.17221 | 5.51958 | 5.33057 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.33092 | 2.53794 | 3.01065 | 2.10762 |
INF1 | Young developing inflorescences (5mm) | 7.97936 | 8.88332 | 6.91767 | 6.44871 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.63324 | 7.13854 | 5.46665 | 6.64417 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.7142 | 5.25437 | 3.79195 | 5.31375 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.41693 | 1.78192 | 1.59777 | 5.54748 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.03173 | 4.96679 | 5.30172 | 4.50537 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.82677 | 0.863813 | 1.16282 | 2.01893 |
CDS Structure of MLOC_58166
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58166.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g20430.1 |
-3 |
3e-138 |
408 |
192/246 (78%) |
13109.m01936 protein SCO1 protein homolog, mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT4G39740.1 |
-3 |
5e-75 |
243 |
116/225 (52%) |
Thioredoxin superfamily protein | chr4:18435586-18437095 REVERSE LENGTH=276 |