MLOC_58156 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.131155.015785.040035.05803
LEAShoots from the seedlings (10 cm shoot stage)4.496952.255152.815612.4141
INF1Young developing inflorescences (5mm)0.0644920.04667910.08080870.0559758
INF2Developing inflorescences (1-1.5 cm)0.06779120.09348210.09568450.0995799
ROORoots from the seedlings (10 cm shoot stage)14.405510.083812.498111.0573
NODDeveloping tillers at six leaf stage, 3rd internode6.720957.188713.110814.0335
CAR5Developing grain, bracts removed (5 DPA)156.506140.763132.285143.673
CAR15Developing grain, bracts removed (15 DPA)1.173840.4796091.464842.46717



CDS Structure of MLOC_58156






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58156.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365933NoneNoneNoneNone
MLOC_58156.1CUST_18166_PI427708080AvailableAvailablecontig_42399 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53860.1 +3 0.0 811 456/753 (61%) 13102.m06162 protein OsSub22 - Putative Subtilisin homologue, expressed
TAIR PP10 AT3G14067.1 +3 0.0 670 405/755 (54%) Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777