MLOC_58153 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.570812.417073.062892.87493
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.302511.010951.777941.40927
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.04125940.03907390.03942990.0408737
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58153






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58153.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252568.1NoneNoneNoneNone
MLOC_58153.1CUST_3891_PI427708080AvailableAvailablecontig_42393 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02230.1 +1 0.0 771 413/578 (71%) 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
TAIR PP10 AT2G46740.1 +1 0.0 550 296/556 (53%) D-arabinono-1,4-lactone oxidase family protein | chr2:19205182-19207455 REVERSE LENGTH=590