- Predicted Gene MLOC_58152
MLOC_58152 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.365588 | 0 | 0.587991 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.96025 | 2.04552 | 3.52955 | 3.15473 |
| INF1 | Young developing inflorescences (5mm) | 0.354383 | 0.717313 | 0 | 0.776712 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.866292 | 0.26131 | 0 | 0.919388 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.305513 | 0.185964 | 0 | 0.976507 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.382584 | 0 | 0 | 0.544621 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.332938 | 0 | 0.5048 | 1.51177 |
CDS Structure of MLOC_58152
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58152.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g07170.1 |
-3 |
1e-27 |
105 |
50/82 (61%) |
13112.m00748 protein transposon protein, putative, Pong sub-class |
| TAIR PP10 |
AT2G13770.1 |
-3 |
2e-25 |
98 |
46/77 (60%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |