MLOC_58146 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.179755.337444.662632.5563
LEAShoots from the seedlings (10 cm shoot stage)34.100322.674517.159419.059
INF1Young developing inflorescences (5mm)178.412180.465173.024119.947
INF2Developing inflorescences (1-1.5 cm)127.457125.477110.424113.651
ROORoots from the seedlings (10 cm shoot stage)10.206537.953728.883531.87
NODDeveloping tillers at six leaf stage, 3rd internode2.552854.6216211.472815.7675
CAR5Developing grain, bracts removed (5 DPA)46.588238.365744.694934.6378
CAR15Developing grain, bracts removed (15 DPA)19.507117.121816.580732.6433



CDS Structure of MLOC_58146






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58146.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58146.1CUST_7999_PI427708083AvailableAvailablecontig_42390 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46310.1 -3 4e-134 427 260/398 (65%) 13104.m04656 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT3G06530.3 -3 2e-55 200 140/399 (35%) ARM repeat superfamily protein | chr3:2022596-2033637 FORWARD LENGTH=2188