MLOC_58141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.587673.388684.157734.0924
LEAShoots from the seedlings (10 cm shoot stage)2.667152.17542.236641.96683
INF1Young developing inflorescences (5mm)1.635932.056381.748361.51115
INF2Developing inflorescences (1-1.5 cm)2.066662.595182.534142.58474
ROORoots from the seedlings (10 cm shoot stage)6.707143.988084.324335.07063
NODDeveloping tillers at six leaf stage, 3rd internode11.267615.86129.91344.9855
CAR5Developing grain, bracts removed (5 DPA)4.625985.751056.467945.31372
CAR15Developing grain, bracts removed (15 DPA)1.481011.816562.040983.93357



CDS Structure of MLOC_58141






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58141.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58141.2CUST_7998_PI427708083AvailableAvailablecontig_42386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65720.1 -1 0.0 528 244/281 (87%) 13101.m07105 protein expressed protein
TAIR PP10 AT5G67540.1 -1 1e-153 454 202/277 (73%) Arabinanase/levansucrase/invertase | chr5:26944253-26946058 REVERSE LENGTH=466