MLOC_58140 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)000.03253170.0263271
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.078840.01835040.02044580.0358859
CAR15Developing grain, bracts removed (15 DPA)0.2802080.2529460.3811250.651341



CDS Structure of MLOC_58140






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58140.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374895NoneNoneNoneNone
MLOC_58140.1CUST_3890_PI427708080AvailableAvailablecontig_42384 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51620.1 +1 0.0 1131 612/743 (82%) 13103.m05622 protein DUF221 domain containing protein, expressed
TAIR PP10 AT1G58520.1 +1 0.0 675 395/695 (57%) | Symbols: RXW8 | lipases;hydrolases, acting on ester bonds | chr1:21733543-21738165 FORWARD LENGTH=746