- Predicted Gene MLOC_58106
MLOC_58106 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58106_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58106_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.73289 | 6.19657 | 4.39661 | 5.2379 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.5545 | 29.8046 | 34.4762 | 24.4833 |
INF1 | Young developing inflorescences (5mm) | 5.29936 | 6.49003 | 4.95887 | 4.87207 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.13121 | 4.97209 | 4.1869 | 4.96126 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.74094 | 4.34444 | 5.10219 | 5.26228 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.31629 | 10.5526 | 13.3746 | 38.0459 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.41416 | 4.97085 | 5.08441 | 4.74662 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.779076 | 0.935681 | 0.349082 | 1.80179 |
CDS Structure of MLOC_58106
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58106.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g52420.1 |
+3 |
4e-177 |
508 |
269/337 (80%) |
13102.m05975 protein peptidase, M24 family protein, putative, expressed |
TAIR PP10 |
AT4G37040.1 |
+3 |
5e-157 |
455 |
233/313 (74%) |
| Symbols: MAP1D | methionine aminopeptidase 1D | chr4:17455175-17457085 FORWARD LENGTH=350 |