- Predicted Gene MLOC_58105
MLOC_58105 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.3834 | 17.4465 | 16.3257 | 16.9989 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 48.5209 | 28.8285 | 23.6574 | 30.6876 |
| INF1 | Young developing inflorescences (5mm) | 12.1097 | 7.9182 | 8.01789 | 8.16084 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.9006 | 5.16492 | 5.5782 | 5.86132 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.41716 | 2.7179 | 2.76026 | 3.24642 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.59289 | 8.8917 | 10.3087 | 31.0001 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.6628 | 14.8402 | 16.5648 | 16.273 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.36833 | 1.39271 | 1.32781 | 3.17161 |
CDS Structure of MLOC_58105
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58105.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g35630.1 |
-2 |
0.0 |
751 |
463/599 (77%) |
13112.m03651 protein elongation factor TS family protein, expressed |
| TAIR PP10 |
AT4G29060.1 |
-2 |
0.0 |
807 |
499/884 (56%) |
| Symbols: emb2726 | elongation factor Ts family protein | chr4:14317744-14321315 FORWARD LENGTH=953 |
