MLOC_58104 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.28678.276978.126097.56815
LEAShoots from the seedlings (10 cm shoot stage)6.0626311.859513.88397.05209
INF1Young developing inflorescences (5mm)17.334916.308616.909413.902
INF2Developing inflorescences (1-1.5 cm)12.025713.588915.940514.6797
ROORoots from the seedlings (10 cm shoot stage)22.566123.366324.72527.3879
NODDeveloping tillers at six leaf stage, 3rd internode18.329318.10418.20155.4709
CAR5Developing grain, bracts removed (5 DPA)11.103510.65219.983469.80243
CAR15Developing grain, bracts removed (15 DPA)5.846716.128365.6181413.4684



CDS Structure of MLOC_58104






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58104.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249542.1NoneNoneNoneNone
MLOC_58104.1CUST_6980_PI427708080AvailableAvailablecontig_42352 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g35640.1 +1 3e-114 340 186/253 (74%) 13112.m03654 protein OsAPRL6 adenosine 5-phosphosulfate reductase-like OsAPRL6, expressed
TAIR PP10 AT3G03860.1 +1 4e-44 157 106/243 (44%) | Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465-994315 FORWARD LENGTH=300