MLOC_58102 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.91035.670626.007256.18278
LEAShoots from the seedlings (10 cm shoot stage)39.823943.715543.500533.7014
INF1Young developing inflorescences (5mm)1.015130.5510150.8897920.727745
INF2Developing inflorescences (1-1.5 cm)0.4808650.4039720.6416660.567533
ROORoots from the seedlings (10 cm shoot stage)1.448181.993832.329352.15301
NODDeveloping tillers at six leaf stage, 3rd internode1.436780.7099631.008361.91097
CAR5Developing grain, bracts removed (5 DPA)0.930511.014460.9001610.983139
CAR15Developing grain, bracts removed (15 DPA)1.008220.7044880.9859182.27712



CDS Structure of MLOC_58102






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58102.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360884NoneNoneNoneNone
AK374963NoneNoneNoneNone
MLOC_58102.1CUST_3883_PI427708080AvailableAvailablecontig_42350 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01250.1 -2 0.0 714 369/475 (78%) 13106.m00025 protein cytochrome P450, putative, expressed
TAIR PP10 AT5G06900.1 -2 7e-101 329 186/472 (39%) | Symbols: CYP93D1 | cytochrome P450, family 93, subfamily D, polypeptide 1 | chr5:2136160-2137925 REVERSE LENGTH=507