- Predicted Gene MLOC_58041
MLOC_58041 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.4643 | 15.6645 | 15.2967 | 15.6093 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 45.3989 | 69.4709 | 79.0998 | 57.3046 |
| INF1 | Young developing inflorescences (5mm) | 8.8797 | 11.4377 | 19.7997 | 10.996 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.6987 | 13.6402 | 20.7106 | 17.4865 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.86 | 19.2483 | 16.3054 | 22.9165 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.9918 | 11.5242 | 5.66284 | 35.9513 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.58222 | 9.34493 | 7.81087 | 8.42466 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.665969 | 0.339568 | 0.507473 | 1.22005 |
CDS Structure of MLOC_58041
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58041.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g40670.1 |
+3 |
0.0 |
625 |
301/376 (80%) |
13103.m04393 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| TAIR PP10 |
AT5G08030.1 |
+3 |
7e-180 |
519 |
253/362 (70%) |
PLC-like phosphodiesterases superfamily protein | chr5:2575152-2576770 REVERSE LENGTH=372 |
