- Predicted Gene MLOC_58033
MLOC_58033 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.83167 | 3.92479 | 3.63033 | 4.74686 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.71468 | 0.952372 | 1.58234 | 1.34744 |
| INF1 | Young developing inflorescences (5mm) | 7.33525 | 8.30981 | 6.59286 | 7.47785 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.15283 | 6.35164 | 6.37217 | 8.21793 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.89427 | 4.72621 | 4.85696 | 7.02755 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.478934 | 0.621686 | 1.78466 | 3.06037 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.30669 | 5.84549 | 6.20113 | 7.01311 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.6295 | 1.34358 | 0.782645 | 3.62015 |
CDS Structure of MLOC_58033
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58033.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g42990.1 |
-3 |
2e-116 |
366 |
228/341 (67%) |
13101.m04430 protein PPR repeat domain containing protein, putative |
| TAIR PP10 |
AT4G36680.1 |
-3 |
3e-23 |
102 |
78/234 (33%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17292479-17293717 REVERSE LENGTH=412 |