- Predicted Gene MLOC_57994
MLOC_57994 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.1316 | 8.30917 | 9.0982 | 8.88056 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.22021 | 4.34548 | 5.96587 | 3.84684 |
INF1 | Young developing inflorescences (5mm) | 5.50961 | 5.12168 | 7.58723 | 4.95527 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.4208 | 7.67328 | 6.86638 | 7.1384 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.94107 | 5.47075 | 7.11898 | 6.90379 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.40509 | 4.27805 | 6.3843 | 14.6677 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.84735 | 4.48803 | 5.64343 | 4.77767 |
CAR15 | Developing grain, bracts removed (15 DPA) | 22.9139 | 21.1183 | 17.5904 | 47.2718 |
CDS Structure of MLOC_57994
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57994.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45090.2 |
+2 |
7e-55 |
179 |
90/146 (62%) |
13106.m04744 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |