- Predicted Gene MLOC_57993
MLOC_57993 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.98557 | 1.12469 | 1.55271 | 1.20019 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.813069 | 0.86739 | 1.95753 | 0.803033 |
| INF1 | Young developing inflorescences (5mm) | 1.71255 | 2.12669 | 1.95914 | 1.29471 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.29608 | 2.7995 | 2.82351 | 2.32498 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.31432 | 1.94119 | 2.32105 | 2.00492 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.50962 | 0.776743 | 0.991434 | 2.00747 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.670938 | 0.507218 | 0.499288 | 0.43724 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.288046 | 0.132101 | 0.299282 | 0.471279 |
CDS Structure of MLOC_57993
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57993.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g38880.1 |
+3 |
3e-27 |
110 |
51/58 (88%) |
13104.m03747 protein dynein light chain type 1 domain containing protein, expressed |
| TAIR PP10 |
AT1G23220.1 |
+3 |
6e-23 |
96 |
40/50 (80%) |
Dynein light chain type 1 family protein | chr1:8242614-8244136 FORWARD LENGTH=129 |