MLOC_57993 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.985571.124691.552711.20019
LEAShoots from the seedlings (10 cm shoot stage)0.8130690.867391.957530.803033
INF1Young developing inflorescences (5mm)1.712552.126691.959141.29471
INF2Developing inflorescences (1-1.5 cm)2.296082.79952.823512.32498
ROORoots from the seedlings (10 cm shoot stage)3.314321.941192.321052.00492
NODDeveloping tillers at six leaf stage, 3rd internode0.509620.7767430.9914342.00747
CAR5Developing grain, bracts removed (5 DPA)0.6709380.5072180.4992880.43724
CAR15Developing grain, bracts removed (15 DPA)0.2880460.1321010.2992820.471279



CDS Structure of MLOC_57993






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57993.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57993.1NoneAvailableAvailablecontig_422542 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g38880.1 +3 3e-27 110 51/58 (88%) 13104.m03747 protein dynein light chain type 1 domain containing protein, expressed
TAIR PP10 AT1G23220.1 +3 6e-23 96 40/50 (80%) Dynein light chain type 1 family protein | chr1:8242614-8244136 FORWARD LENGTH=129