- Predicted Gene MLOC_57983
MLOC_57983 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57983_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57983_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.055 | 9.22009 | 9.11826 | 10.4507 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.98023 | 4.48854 | 5.11816 | 5.23318 |
INF1 | Young developing inflorescences (5mm) | 10.9987 | 11.741 | 13.4478 | 10.6978 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.0652 | 10.0294 | 12.5122 | 12.7496 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.3816 | 10.5072 | 14.5114 | 14.327 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.9822 | 6.45484 | 10.693 | 24.9787 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.35315 | 9.20313 | 8.60267 | 9.24434 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.7949 | 4.33418 | 4.45442 | 10.289 |
CDS Structure of MLOC_57983
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57983.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g07916.1 |
-1 |
2e-62 |
210 |
124/167 (74%) |
13111.m00830 protein nifU, putative, expressed |
TAIR PP10 |
AT5G49940.1 |
-1 |
4e-55 |
189 |
110/167 (66%) |
| Symbols: NFU2, ATCNFU2 | NIFU-like protein 2 | chr5:20315464-20317228 FORWARD LENGTH=235 |