MLOC_57981 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4180460.761420.72940.665994
LEAShoots from the seedlings (10 cm shoot stage)0.1565160.1901700.135516
INF1Young developing inflorescences (5mm)00.18357100.19357
INF2Developing inflorescences (1-1.5 cm)0.2890590.08020160.04942510.173744
ROORoots from the seedlings (10 cm shoot stage)0.6826110.1916660.1347350.247203
NODDeveloping tillers at six leaf stage, 3rd internode0.096207800.03982030.0352304
CAR5Developing grain, bracts removed (5 DPA)1.647482.005692.376582.00487
CAR15Developing grain, bracts removed (15 DPA)1478.441671.561416.233895.12



CDS Structure of MLOC_57981






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57981.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372468NoneNoneNoneNone
MLOC_57981.1CUST_3860_PI427708080AvailableAvailablecontig_42250 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44470.1 +3 3e-67 214 110/181 (61%) 13104.m04434 protein KUN1 - Kunitz-type trypsin inhibitor precursor, expressed
TAIR PP10 AT1G73260.1 +3 1e-13 69 58/188 (31%) | Symbols: ATKTI1, KTI1 | kunitz trypsin inhibitor 1 | chr1:27547410-27548057 REVERSE LENGTH=215