- Predicted Gene MLOC_57940
MLOC_57940 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.676847 | 0.467894 | 0.385458 | 0.486484 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.20983 | 0.922741 | 2.09177 | 1.10675 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0786994 | 0.109659 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.352 | 4.83525 | 7.54193 | 5.97677 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.17365 | 5.22273 | 5.19218 | 13.4034 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.041233 | 0 | 0 | 0.0381451 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_57940
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57940.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g70050.1 |
+1 |
1e-48 |
167 |
94/150 (63%) |
13101.m07602 protein OsSAUR3 - Auxin-responsive SAUR gene family member |
| TAIR PP10 |
AT5G50760.1 |
+1 |
3e-17 |
80 |
38/81 (47%) |
SAUR-like auxin-responsive protein family | chr5:20644780-20645331 FORWARD LENGTH=183 |