MLOC_57929 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7128980.5480640.892490.581775
LEAShoots from the seedlings (10 cm shoot stage)1.647840.7946841.254480.985958
INF1Young developing inflorescences (5mm)0.1970630.095775500.128306
INF2Developing inflorescences (1-1.5 cm)0.02505750.068254100.0594531
ROORoots from the seedlings (10 cm shoot stage)0.355930.5400630.8068480.548236
NODDeveloping tillers at six leaf stage, 3rd internode0.8893371.478822.033884.49616
CAR5Developing grain, bracts removed (5 DPA)0.9160681.979150.9689121.0922
CAR15Developing grain, bracts removed (15 DPA)3.019823.037262.925145.38347



CDS Structure of MLOC_57929






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57929.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57929.1CUST_7980_PI427708083AvailableAvailablecontig_42220 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g43060.1 +2 6e-45 148 99/315 (31%) 13112.m04541 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----