- Predicted Gene MLOC_57929
MLOC_57929 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57929_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.712898 | 0.548064 | 0.89249 | 0.581775 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.64784 | 0.794684 | 1.25448 | 0.985958 |
INF1 | Young developing inflorescences (5mm) | 0.197063 | 0.0957755 | 0 | 0.128306 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0250575 | 0.0682541 | 0 | 0.0594531 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.35593 | 0.540063 | 0.806848 | 0.548236 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.889337 | 1.47882 | 2.03388 | 4.49616 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.916068 | 1.97915 | 0.968912 | 1.0922 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.01982 | 3.03726 | 2.92514 | 5.38347 |
CDS Structure of MLOC_57929
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57929.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g43060.1 |
+2 |
6e-45 |
148 |
99/315 (31%) |
13112.m04541 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |