MLOC_57928 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3852830.9762741.034590.852928
LEAShoots from the seedlings (10 cm shoot stage)3.062952.956270.5140561.88812
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.564315000.679102
ROORoots from the seedlings (10 cm shoot stage)00.70874902.08934
NODDeveloping tillers at six leaf stage, 3rd internode1.199012.204571.947496.78052
CAR5Developing grain, bracts removed (5 DPA)1.8382.616630.7850061.6614
CAR15Developing grain, bracts removed (15 DPA)4.140583.555654.732258.64422



CDS Structure of MLOC_57928






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57928.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57928.1CUST_7979_PI427708083AvailableAvailablecontig_42220 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g36870.1 +1 1e-16 76 35/52 (67%) 13111.m03609 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----