- Predicted Gene MLOC_57916
MLOC_57916 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57916_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 24.4618 | 20.0566 | 23.8785 | 21.334 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.2016 | 22.1971 | 24.9444 | 18.4049 |
INF1 | Young developing inflorescences (5mm) | 20.2866 | 21.3884 | 26.1047 | 17.7524 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.5819 | 21.5227 | 26.7086 | 27.0423 |
ROO | Roots from the seedlings (10 cm shoot stage) | 25.3472 | 28.3958 | 23.2567 | 31.9972 |
NOD | Developing tillers at six leaf stage, 3rd internode | 47.0626 | 37.8211 | 32.6842 | 119.896 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.4489 | 17.0264 | 17.0484 | 15.97 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.26923 | 6.83607 | 6.79265 | 14.2372 |
CDS Structure of MLOC_57916
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57916.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g38940.2 |
-3 |
0.0 |
687 |
335/386 (87%) |
13106.m04035 protein RMD5 homolog A, putative, expressed |
TAIR PP10 |
AT4G37880.1 |
-3 |
2e-134 |
400 |
203/389 (52%) |
LisH/CRA/RING-U-box domains-containing protein | chr4:17810183-17811349 FORWARD LENGTH=388 |