MLOC_57913 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.763324.601714.262475.29746
LEAShoots from the seedlings (10 cm shoot stage)3.373831.661513.382362.55534
INF1Young developing inflorescences (5mm)22.962723.013124.241521.0054
INF2Developing inflorescences (1-1.5 cm)30.367528.382228.816133.2235
ROORoots from the seedlings (10 cm shoot stage)4.001783.744334.23444.93399
NODDeveloping tillers at six leaf stage, 3rd internode0.5235781.068163.424535.04688
CAR5Developing grain, bracts removed (5 DPA)13.439312.866115.167414.0859
CAR15Developing grain, bracts removed (15 DPA)8.348888.106997.6361219.89



CDS Structure of MLOC_57913






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57913.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372204NoneNoneNoneNone
MLOC_57913.1CUST_3850_PI427708080AvailableAvailablecontig_42206 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g06290.4 -1 1e-83 261 110/142 (77%) 13101.m14988 protein splicing factor, arginine/serine-rich, putative, expressed
TAIR PP10 AT2G37340.1 -1 1e-71 232 101/139 (73%) | Symbols: RSZ33, ATRSZ33, RS2Z33, AT-RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | chr2:15670372-15672331 REVERSE LENGTH=290