- Predicted Gene MLOC_57913
MLOC_57913 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57913_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57913_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.76332 | 4.60171 | 4.26247 | 5.29746 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.37383 | 1.66151 | 3.38236 | 2.55534 |
INF1 | Young developing inflorescences (5mm) | 22.9627 | 23.0131 | 24.2415 | 21.0054 |
INF2 | Developing inflorescences (1-1.5 cm) | 30.3675 | 28.3822 | 28.8161 | 33.2235 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.00178 | 3.74433 | 4.2344 | 4.93399 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.523578 | 1.06816 | 3.42453 | 5.04688 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.4393 | 12.8661 | 15.1674 | 14.0859 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.34888 | 8.10699 | 7.63612 | 19.89 |
CDS Structure of MLOC_57913
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57913.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g06290.4 |
-1 |
1e-83 |
261 |
110/142 (77%) |
13101.m14988 protein splicing factor, arginine/serine-rich, putative, expressed |
TAIR PP10 |
AT2G37340.1 |
-1 |
1e-71 |
232 |
101/139 (73%) |
| Symbols: RSZ33, ATRSZ33, RS2Z33, AT-RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | chr2:15670372-15672331 REVERSE LENGTH=290 |