- Predicted Gene MLOC_57898
MLOC_57898 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57898_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57898_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.161474 | 0 | 0.151473 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0876671 | 0.102751 | 0.181706 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.157216 | 0.6521 | 0.102578 | 0.446407 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.353152 | 0 | 0.28234 | 0.178961 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.219129 | 0 | 0.029077 | 0.0467811 |
CAR5 | Developing grain, bracts removed (5 DPA) | 401.531 | 440.271 | 349.707 | 423.381 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.44349 | 0.863346 | 1.47224 | 3.05638 |
CDS Structure of MLOC_57898
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57898.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g15710.1 |
+2 |
1e-43 |
145 |
74/127 (58%) |
13102.m01752 protein plastocyanin-like domain containing protein, putative |
TAIR PP10 |
AT2G02850.1 |
+2 |
2e-33 |
118 |
59/129 (46%) |
| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129 |