- Predicted Gene MLOC_57883
MLOC_57883 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.0829 | 8.14079 | 9.34725 | 7.80847 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.66533 | 9.1524 | 9.43774 | 6.31106 |
| INF1 | Young developing inflorescences (5mm) | 9.97095 | 10.1988 | 11.7026 | 6.67925 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.3622 | 9.35595 | 9.61189 | 7.38135 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.72331 | 9.80121 | 8.72467 | 9.16821 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.82345 | 5.96893 | 7.48132 | 17.5409 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.23505 | 7.30594 | 9.24494 | 5.6583 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.07248 | 2.0567 | 2.09176 | 3.48372 |
CDS Structure of MLOC_57883
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57883.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g13590.1 |
+1 |
9e-30 |
120 |
56/64 (88%) |
13107.m01416 protein expressed protein |
| TAIR PP10 |
AT2G37860.3 |
+1 |
5e-26 |
108 |
49/64 (77%) |
| Symbols: LCD1 | Protein of unknown function (DUF3411) | chr2:15856952-15858793 FORWARD LENGTH=432 |