MLOC_57881 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.357962.507982.225882.52558
LEAShoots from the seedlings (10 cm shoot stage)6.093137.037945.944615.44375
INF1Young developing inflorescences (5mm)0.1776960.2315270.1425220.177755
INF2Developing inflorescences (1-1.5 cm)0.1808280.1107330.1589270.176044
ROORoots from the seedlings (10 cm shoot stage)10.885310.706610.764213.0018
NODDeveloping tillers at six leaf stage, 3rd internode4.40334.707784.8601913.8316
CAR5Developing grain, bracts removed (5 DPA)0.3446570.3701860.3090610.367488
CAR15Developing grain, bracts removed (15 DPA)0.166210.1219270.1376580.379166



CDS Structure of MLOC_57881






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57881.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375551NoneNoneNoneNone
MLOC_57881.1CUST_3844_PI427708080AvailableAvailablecontig_42177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02996.1 +2 0.0 781 481/718 (67%) 13108.m00246 protein receptor-like kinase, putative, expressed
TAIR PP10 AT5G10530.1 +2 7e-107 348 178/320 (56%) Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651