MLOC_5785 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5785_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5785_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.126497 | 0.039251 | 0 | 0.0789596 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.146468 | 0 | 0.197918 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0739102 | 0 | 0.0707395 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0946634 | 0.0607418 | 0 | 0.10558 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.231341 | 0.0451013 | 0.114596 | 0.0869606 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0304204 | 0.0665525 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.87819 | 1.88501 | 1.56549 | 1.71203 |
CAR15 | Developing grain, bracts removed (15 DPA) | 670.988 | 642.639 | 605.975 | 1498.09 |
CDS Structure of MLOC_5785
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5785.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g34570.1 |
-3 |
1e-163 |
470 |
238/327 (73%) |
13107.m03521 protein FAD dependent oxidoreductase domain containing protein, expressed |
TAIR PP10 |
AT5G54770.1 |
-3 |
1e-138 |
406 |
200/283 (71%) |
| Symbols: THI1, TZ, THI4 | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) | chr5:22246634-22247891 FORWARD LENGTH=349 |