- Predicted Gene MLOC_57847
MLOC_57847 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.6613 | 14.9173 | 14.358 | 13.9558 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0443 | 5.70455 | 6.91122 | 5.77388 |
| INF1 | Young developing inflorescences (5mm) | 9.39809 | 9.9349 | 9.5106 | 7.27473 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.10435 | 9.70362 | 8.85538 | 9.11561 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.7438 | 13.0087 | 11.5765 | 13.1854 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.7807 | 16.6358 | 14.8939 | 44.4643 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.3207 | 11.5461 | 10.6708 | 9.19571 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.67943 | 7.23653 | 7.48613 | 15.812 |
CDS Structure of MLOC_57847
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57847.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g53450.1 |
-2 |
8e-173 |
508 |
283/425 (67%) |
13104.m05500 protein expressed protein |
| TAIR PP10 |
AT5G54920.1 |
-2 |
3e-31 |
129 |
137/500 (27%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=517 |