- Predicted Gene MLOC_57827
MLOC_57827 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.7044 | 31.7394 | 31.5597 | 30.6489 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.7994 | 11.674 | 14.5289 | 12.0492 |
| INF1 | Young developing inflorescences (5mm) | 46.1467 | 47.5528 | 49.5098 | 41.0744 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.6794 | 37.7542 | 37.1024 | 40.9654 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.274 | 24.3087 | 23.8481 | 27.8747 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.58538 | 8.61602 | 11.9378 | 31.7721 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.2157 | 25.3308 | 25.7117 | 24.5581 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.9251 | 10.0009 | 9.32649 | 24.767 |
CDS Structure of MLOC_57827
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57827.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g21990.1 |
-2 |
0.0 |
860 |
425/470 (90%) |
13103.m02641 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT4G15900.1 |
-2 |
0.0 |
689 |
352/478 (74%) |
| Symbols: PRL1 | pleiotropic regulatory locus 1 | chr4:9023775-9027443 FORWARD LENGTH=486 |
