- Predicted Gene MLOC_57825
MLOC_57825 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57825_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57825_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.432206 | 0.381653 | 0.484633 | 0.378265 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.745896 | 0.532143 | 0.235544 | 0.393017 |
INF1 | Young developing inflorescences (5mm) | 1.01544 | 0.56014 | 0.660815 | 0.586268 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.18409 | 1.22762 | 0.995022 | 1.15674 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.192303 | 0.321809 | 0.604543 | 0.336012 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.196962 | 0.374004 | 0.124058 | 0.851135 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.189162 | 0.604652 | 0.555049 | 0.39269 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.136402 | 0.193547 | 0.33183 | 0.410426 |
CDS Structure of MLOC_57825
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57825.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g30780.1 |
+3 |
6e-49 |
171 |
81/187 (43%) |
13112.m03136 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |