MLOC_57825 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4322060.3816530.4846330.378265
LEAShoots from the seedlings (10 cm shoot stage)0.7458960.5321430.2355440.393017
INF1Young developing inflorescences (5mm)1.015440.560140.6608150.586268
INF2Developing inflorescences (1-1.5 cm)1.184091.227620.9950221.15674
ROORoots from the seedlings (10 cm shoot stage)0.1923030.3218090.6045430.336012
NODDeveloping tillers at six leaf stage, 3rd internode0.1969620.3740040.1240580.851135
CAR5Developing grain, bracts removed (5 DPA)0.1891620.6046520.5550490.39269
CAR15Developing grain, bracts removed (15 DPA)0.1364020.1935470.331830.410426



CDS Structure of MLOC_57825






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57825.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57825.1NoneAvailableAvailablecontig_42130 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g30780.1 +3 6e-49 171 81/187 (43%) 13112.m03136 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----