- Predicted Gene MLOC_57824
MLOC_57824 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57824_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57824_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 18.0333 | 12.8218 | 11.4216 | 15.6092 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.92263 | 1.25954 | 2.65862 | 1.92596 |
INF1 | Young developing inflorescences (5mm) | 11.3259 | 14.817 | 15.3304 | 12.9724 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.90692 | 10.2329 | 10.9306 | 12.3217 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.72481 | 8.12995 | 9.29556 | 10.1336 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.85907 | 3.17198 | 3.75317 | 9.60615 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.52561 | 8.45494 | 6.66303 | 8.25257 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.8102 | 1.61919 | 1.54401 | 4.42766 |
CDS Structure of MLOC_57824
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57824.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g15290.2 |
+1 |
2e-64 |
207 |
104/114 (91%) |
13101.m01689 protein ribosomal L18p/L5e family protein, putative, expressed |
TAIR PP10 |
AT5G27820.1 |
+1 |
3e-51 |
172 |
85/114 (75%) |
Ribosomal L18p/L5e family protein | chr5:9860584-9860928 FORWARD LENGTH=114 |