MLOC_57817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.186427.67630.809829.1178
LEAShoots from the seedlings (10 cm shoot stage)9.343598.9637.887197.30793
INF1Young developing inflorescences (5mm)0.1704780.09459840.0357690.0921979
INF2Developing inflorescences (1-1.5 cm)0.2187610.1815440.1021920.196097
ROORoots from the seedlings (10 cm shoot stage)20.830115.843217.549319.4177
NODDeveloping tillers at six leaf stage, 3rd internode52.636637.27658.0149125.995
CAR5Developing grain, bracts removed (5 DPA)1.419261.608251.643241.55117
CAR15Developing grain, bracts removed (15 DPA)0.1858470.3325760.3876180.70567



CDS Structure of MLOC_57817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57817.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356718NoneNoneNoneNone
MLOC_57817.1CUST_3833_PI427708080AvailableAvailablecontig_42123 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46080.1 +2 0.0 525 262/367 (71%) 13101.m04730 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28600.1 +2 9e-101 312 173/366 (47%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10051228-10053073 REVERSE LENGTH=393