MLOC_57812 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.551764.35886.477656.00975
LEAShoots from the seedlings (10 cm shoot stage)3.493254.028317.05684.07836
INF1Young developing inflorescences (5mm)2.929964.15423.832463.22996
INF2Developing inflorescences (1-1.5 cm)3.198223.853892.908693.97201
ROORoots from the seedlings (10 cm shoot stage)6.061545.025254.362576.20174
NODDeveloping tillers at six leaf stage, 3rd internode5.234145.328915.5793616.7872
CAR5Developing grain, bracts removed (5 DPA)3.967695.019634.06844.76705
CAR15Developing grain, bracts removed (15 DPA)1.628441.358371.306263.67802



CDS Structure of MLOC_57812






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57812.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362449NoneNoneNoneNone
MLOC_57812.1CUST_3831_PI427708080AvailableAvailablecontig_42120 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56654.1 +2 4e-63 205 120/192 (63%) 13104.m05907 protein BSD domain-containing protein, putative, expressed
TAIR PP10 AT3G24820.1 +2 1e-25 103 55/136 (40%) BSD domain-containing protein | chr3:9062717-9064366 REVERSE LENGTH=186