MLOC_5781 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.177721.046311.420811.06547
LEAShoots from the seedlings (10 cm shoot stage)0.613410.156710.163510.246242
INF1Young developing inflorescences (5mm)0.2072340.4026490.3799920.282506
INF2Developing inflorescences (1-1.5 cm)0.6468060.6550.6470970.723197
ROORoots from the seedlings (10 cm shoot stage)1.427590.5848280.4130550.626361
NODDeveloping tillers at six leaf stage, 3rd internode0.2086210.2586430.425690.64368
CAR5Developing grain, bracts removed (5 DPA)0.9316310.9364890.9576950.931679
CAR15Developing grain, bracts removed (15 DPA)0.19219400.03921520.30992



CDS Structure of MLOC_5781






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5781.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5781.1CUST_7963_PI427708083AvailableAvailablecontig_136687 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38610.1 -2 6e-177 516 320/408 (78%) 13112.m03980 protein lectin-like receptor kinase, putative, expressed
TAIR PP10 AT3G55550.1 -2 3e-109 341 202/412 (49%) Concanavalin A-like lectin protein kinase family protein | chr3:20600019-20602073 REVERSE LENGTH=684