MLOC_57806 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains49.223954.291653.692946.2564
LEAShoots from the seedlings (10 cm shoot stage)83.032636.413944.943143.3232
INF1Young developing inflorescences (5mm)39.193445.803854.1333.8494
INF2Developing inflorescences (1-1.5 cm)29.837537.097232.195232.3283
ROORoots from the seedlings (10 cm shoot stage)67.301852.150735.393554.3303
NODDeveloping tillers at six leaf stage, 3rd internode118.559157.447234.302451.599
CAR5Developing grain, bracts removed (5 DPA)35.493733.137434.33929.2858
CAR15Developing grain, bracts removed (15 DPA)3.596683.306074.475967.65136



CDS Structure of MLOC_57806






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57806.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362078NoneNoneNoneNone
MLOC_57806.2CUST_3829_PI427708080AvailableAvailablecontig_42113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g05570.1 +1 0.0 1026 564/701 (80%) 13107.m00513 protein ERD4 protein, putative, expressed
TAIR PP10 AT1G30360.1 +1 0.0 696 385/695 (55%) | Symbols: ERD4 | Early-responsive to dehydration stress protein (ERD4) | chr1:10715892-10718799 FORWARD LENGTH=724